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David J. D. Earn, Junling Ma, Hendrik Poinar, Jonathan Dushoff, and Benjamin M. Bolker (2020)

Acceleration of plague outbreaks in the second pandemic

PNAS – Proceedings of the National Academy of Sciences of the U.S.A., 117(44):27703–27711.

Epidemics of plague devastated Europe's population throughout the Medieval and Renaissance periods. Genetic studies of modest numbers of skeletal remains indicate that the causative agent of all these epidemics was the bacterium Yersinia pestis, but such analyses cannot identify overall patterns of transmission dynamics. Analysis of thousands of archival records from London, United Kingdom, reveals that plague epidemics spread much faster in the 17th century than in the 14th century.Historical records reveal the temporal patterns of a sequence of plague epidemics in London, United Kingdom, from the 14th to 17th centuries. Analysis of these records shows that later epidemics spread significantly faster (``accelerated''). Between the Black Death of 1348 and the later epidemics that culminated with the Great Plague of 1665, we estimate that the epidemic growth rate increased fourfold. Currently available data do not provide enough information to infer the mode of plague transmission in any given epidemic; nevertheless, order-of-magnitude estimates of epidemic parameters suggest that the observed slow growth rates in the 14th century are inconsistent with direct (pneumonic) transmission. We discuss the potential roles of demographic and ecological factors, such as climate change or human or rat population density, in driving the observed acceleration.